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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44213.1Citrate transporter; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680:IPR000802; KEGG: tye:THEYE_A0731 arsenical pump membrane protein; PFAM: Citrate transporter; SPTR: Arsenical pump membrane protein; IMG reference gene:2505283619; PFAM: Citrate transporter. (591 aa)    
Predicted Functional Partners:
AEH44214.1
COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016:IPR006015; KEGG: tye:THEYE_A1621 universal stress protein family; PFAM: UspA domain-containing protein; SPTR: Universal stress protein family; IMG reference gene:2505283620; PFAM: Universal stress protein family.
 
   
 0.793
AEH44212.1
Hypothetical protein; InterPro IPR020327; KEGG: afu:AF1562 hypothetical protein; SPTR: Uncharacterized protein AF_1562; IMG reference gene:2505283618.
       0.501
AEH44211.1
Protein of unknown function DUF81; InterPro IPR002781; KEGG: tye:THEYE_A0738 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Putative uncharacterized protein; IMG reference gene:2505283617; PFAM: Sulfite exporter TauE/SafE.
  
    0.478
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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