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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selAL-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (463 aa)    
Predicted Functional Partners:
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
 
  
 0.984
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
     
 0.927
AEH45959.1
COGs: COG3276 Selenocysteine-specific translation elongation factor; InterProIPR000795:IPR005829:IPR004161:IPR015190:IPR 015191:IPR005225:IPR004535; KEGG: sfu:Sfum_1220 selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; PRIAM: Sulfate adenylyltransferase; SPTR: Selenocysteine-specific translation elongation factor SelB; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; IMG reference [...]
 
  
 0.862
AEH44299.1
Beta-lactamase domain-containing protein; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: dol:Dole_3235 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; IMG reference gene:2505283706; PFAM: Metallo-beta-lactamase superfamily.
       0.825
AEH44300.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440:IPR019734:IPR013026; KEGG: dba:Dbac_3412 diguanylate cyclase with TPR repeats; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Diguanylate cyclase with TPR repeats; IMG reference gene:2505283707; PFAM: Tetratricopeptide repeat.
       0.825
AEH44955.1
Selenium metabolism protein YedF; InterPro IPR001455:IPR019870; KEGG: drm:Dred_1242 SirA family protein; PFAM: SirA-like domain-containing protein; SPTR: Transcriptional regulator; TIGRFAM: selenium metabolism protein YedF; IMG reference gene:2505284394; PFAM: DsrE/DsrF-like family; SirA-like protein; TIGRFAM: selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
 
  
 0.698
AEH46059.1
MoaD family protein; InterPro IPR003749:IPR010038; KEGG: pmo:Pmob_0384 MoaD family protein; PFAM: thiamineS protein; SPTR: MoaD family protein; TIGRFAM: MoaD family protein; IMG reference gene:2505285550; PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal.
    
   0.538
AEH44302.1
Hypothetical protein; KEGG: sul:SYO3AOP1_0961 SMC domain protein; SPTR: SMC domain protein; IMG reference gene:2505283709.
       0.532
AEH44303.1
KEGG: ddi:DDB_G0293570 RUN domain-containing protein; SPTR: RUN domain-containing protein; IMG reference gene:2505283710.
       0.532
AEH44304.1
KEGG: tet:TTHERM_00537070 hypothetical protein; SPTR: DNA polymerase III, delta subunit; IMG reference gene:2505283711.
       0.532
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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