Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH44304.1KEGG: tet:TTHERM_00537070 hypothetical protein; SPTR: DNA polymerase III, delta subunit; IMG reference gene:2505283711. (279 aa)    
Predicted Functional Partners:
AEH44302.1
Hypothetical protein; KEGG: sul:SYO3AOP1_0961 SMC domain protein; SPTR: SMC domain protein; IMG reference gene:2505283709.
       0.778
AEH44303.1
KEGG: ddi:DDB_G0293570 RUN domain-containing protein; SPTR: RUN domain-containing protein; IMG reference gene:2505283710.
       0.778
AEH44305.1
InterPro IPR003660; KEGG: ant:Arnit_0401 histidine kinase; PFAM: histidine kinase HAMP region domain protein; SPTR: Histidine kinase; IMG reference gene:2505283712; PFAM: HAMP domain; Protein of unknown function (DUF3365).
       0.773
AEH44299.1
Beta-lactamase domain-containing protein; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: dol:Dole_3235 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; IMG reference gene:2505283706; PFAM: Metallo-beta-lactamase superfamily.
       0.532
AEH44300.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440:IPR019734:IPR013026; KEGG: dba:Dbac_3412 diguanylate cyclase with TPR repeats; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Diguanylate cyclase with TPR repeats; IMG reference gene:2505283707; PFAM: Tetratricopeptide repeat.
       0.532
selA
L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
       0.532
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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