close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44305.1InterPro IPR003660; KEGG: ant:Arnit_0401 histidine kinase; PFAM: histidine kinase HAMP region domain protein; SPTR: Histidine kinase; IMG reference gene:2505283712; PFAM: HAMP domain; Protein of unknown function (DUF3365). (339 aa)    
Predicted Functional Partners:
AEH44300.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440:IPR019734:IPR013026; KEGG: dba:Dbac_3412 diguanylate cyclase with TPR repeats; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Diguanylate cyclase with TPR repeats; IMG reference gene:2505283707; PFAM: Tetratricopeptide repeat.
 
     0.815
AEH44302.1
Hypothetical protein; KEGG: sul:SYO3AOP1_0961 SMC domain protein; SPTR: SMC domain protein; IMG reference gene:2505283709.
       0.773
AEH44303.1
KEGG: ddi:DDB_G0293570 RUN domain-containing protein; SPTR: RUN domain-containing protein; IMG reference gene:2505283710.
       0.773
AEH44304.1
KEGG: tet:TTHERM_00537070 hypothetical protein; SPTR: DNA polymerase III, delta subunit; IMG reference gene:2505283711.
       0.773
AEH44897.1
InterPro IPR013249:IPR014284; KEGG: oan:Oant_4467 FliA/WhiG family RNA polymerase sigma 28 subunit; PFAM: Sigma-70 region 4 type 2; SPTR: Putative RNA polymerase, sigma 28 subunit, FliA/WhiG family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; IMG reference gene:2505284336; PFAM: Sigma-70, region 4; Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
 
     0.760
AEH44948.1
Response regulator receiver sensor hybrid histidine kinase; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR020053:IPR001789:IPR003661:IPR003594:IPR 004358:IPR005467; KEGG: cts:Ctha_2310 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SPTR: Putative Histidine kinase; IMG reference gene:2505284387; PFAM: Histidine [...]
 
 
 
 0.749
AEH44049.1
KEGG: pca:Pcar_3121 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505283447.
  
     0.747
AEH44889.1
AsmA family protein; COGs: COG2982 Uncharacterized protein involved in outer membrane biogenesis; InterPro IPR007844; KEGG: geo:Geob_2842 AsmA family protein; PFAM: AsmA family protein; SPTR: AsmA family protein; IMG reference gene:2505284327; PFAM: AsmA family.
  
     0.737
AEH45931.1
Diacylglycerol kinase catalytic region; InterPro IPR001206; KEGG: avn:Avin_44360 hypothetical protein; PFAM: diacylglycerol kinase catalytic region; SPTR: DAG-kinase catalytic domain (Presumed); IMG reference gene:2505285419; PFAM: Diacylglycerol kinase catalytic domain.
  
     0.732
AEH45975.1
InterPro IPR007813; KEGG: sfu:Sfum_3660 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Fimbrial assembly family protein; IMG reference gene:2505285464; PFAM: Fimbrial assembly protein (PilN).
  
     0.717
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.