close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44341.1FlgN family protein; InterPro IPR007809; KEGG: rde:RD1_0161 hypothetical protein; PFAM: FlgN family protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505283748; PFAM: FlgN protein. (110 aa)    
Predicted Functional Partners:
AEH44340.1
COGs: COG1256 Flagellar hook-associated protein; InterPro IPR002371:IPR010930:IPR018247; KEGG: dde:Dde_3152 flagellar hook-associated protein; PFAM: protein of unknown function DUF1078 domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: flagellar hook-associated protein FlgK; IMG reference gene:2505283747; PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK.
       0.824
AEH44343.1
Flagellar protein FlgJ; InterPro IPR019301; KEGG: csc:Csac_0596 hypothetical protein; PFAM: Flagellar protein FlgJ-like; SPTR: Putative uncharacterized protein; IMG reference gene:2505283750; PFAM: Rod binding protein.
       0.816
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.813
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.807
AEH44346.1
Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
       0.807
AEH44339.1
COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR013384:IPR001492; KEGG: mta:Moth_0747 flagellar hook-associated protein FlgL; PFAM: flagellin domain protein; SPTR: Flagellin-like; TIGRFAM: flagellar hook-associated protein 3; IMG reference gene:2505283746; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3.
       0.794
AEH44342.1
Hypothetical protein; IMG reference gene:2505283749.
       0.773
csrA
Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
       0.738
AEH44347.1
COGs: COG4786 Flagellar basal body rod protein; InterProIPR020013:IPR012834:IPR001444:IPR010930:IPR 019776; KEGG: dal:Dalk_0993 flagellar basal body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: Flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; IMG reference gene:2505283754; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins; flagellar basal [...]
       0.682
AEH44348.1
COGs: COG4786 Flagellar basal body rod protein; InterPro IPR020013:IPR012836:IPR001444; KEGG: geo:Geob_0627 flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; SPTR: Flagellar basal-body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; IMG reference gene:2505283755; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins.
       0.675
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.