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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44358.1ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: paa:Paes_1086 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; IMG reference gene:2505283765; PFAM: ABC transporter. (216 aa)    
Predicted Functional Partners:
AEH44359.1
Conserved hypothetical protein CHP00245; COGs: COG0390 ABC-type uncharacterized transport system permease component; InterPro IPR005226; KEGG: drt:Dret_1437 hypothetical protein; PFAM: Conserved hypothetical protein CHP00245; SPTR: Putative uncharacterized protein; IMG reference gene:2505283766; PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: TIGR00245 family protein.
  
  
 0.869
AEH44203.1
ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dat:HRM2_17600 HTH-type transcriptional regulator; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: HTH-type transcriptional regulator; IMG reference gene:2505283608; PFAM: ABC transporter.
  
     0.755
AEH44386.1
ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR017871:IPR003593; KEGG: mif:Metin_0717 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; IMG reference gene:2505283793; PFAM: ABC transporter.
  
     0.671
AEH45714.1
ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: mvu:Metvu_0681 ABC transporter releated protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter releated protein; IMG reference gene:2505285188; PFAM: ABC transporter.
  
     0.643
AEH44468.1
COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR004622; KEGG: pca:Pcar_1692 DNA polymerase III, gamma/tau subunits; SPTR: DNA polymerase III, delta prime subunit; TIGRFAM: DNA polymerase III, delta prime subunit; IMG reference gene:2505283882; TIGRFAM: DNA polymerase III, delta' subunit.
  
     0.590
cysS
Cysteine synthase; COGs: COG0215 Cysteinyl-tRNA synthetase; InterProIPR001926:IPR015803:IPR001216:IPR005856:IPR 002308; KEGG: sat:SYN_00075 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: cysteine synthase; cysteinyl-tRNA synthetase; IMG reference gene:2505283966; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteinyl-tRNA synthetase; cysteine synthase B.
 
     0.545
AEH45713.1
ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: mvu:Metvu_0680 ABC transporter releated protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Probable branched-chain amino acid transport ATP-binding protein livF; IMG reference gene:2505285187; PFAM: ABC transporter.
  
     0.541
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
  
     0.510
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.508
rpsI
COGs: COG0103 Ribosomal protein S9; InterPro IPR000754:IPR020574; KEGG: dak:DaAHT2_0353 ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: 30S ribosomal protein S9; IMG reference gene:2505284689; PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.
  
     0.487
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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