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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AEH44430.1Tripartite ATP-independent periplasmic transporter DctQ component; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: ddf:DEFDS_0771 C4-dicarboxylate transporter small subunit; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: C4-dicarboxylate transporter, small subunit; IMG reference gene:2505283843; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component. (163 aa)    
Predicted Functional Partners:
AEH44429.1
Extracellular solute-binding protein, family 7; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: ddf:DEFDS_0770 C4-dicarboxylate transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: C4-dicarboxylate transporter, substrate-binding protein; IMG reference gene:2505283842; PFAM: Bacterial extracellular solute-binding protein, family 7.
 
     0.947
AEH44431.1
TRAP dicarboxylate transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: ddf:DEFDS_0772 C4-dicarboxylate transporter large subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: C4-dicarboxylate transporter, large subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; IMG reference gene:2505283844; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
 
    0.946
AEH44428.1
5-oxoprolinase (ATP-hydrolyzing); COGs: COG0146 N-methylhydantoinase B/acetone carboxylase alpha subunit; InterPro IPR003692; KEGG: ddf:DEFDS_0769 N-methylhydantoinase B; PFAM: Hydantoinase B/oxoprolinase; PRIAM: 5-oxoprolinase (ATP-hydrolyzing); SPTR: N-methylhydantoinase B; IMG reference gene:2505283841; PFAM: Hydantoinase B/oxoprolinase.
       0.743
AEH44541.1
TRAP transporter, 4TM/12TM fusion protein; COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR010656:IPR011853; KEGG: nam:NAMH_0701 transporter; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Transporter; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; IMG reference gene:2505283957; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.
  
     0.743
AEH44427.1
5-oxoprolinase (ATP-hydrolyzing); COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit; InterPro IPR008040:IPR002821; KEGG: ddf:DEFDS_0768 N-methylhydantoinase A; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; PRIAM: 5-oxoprolinase (ATP-hydrolyzing); SPTR: N-methylhydantoinase A; IMG reference gene:2505283840; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region.
       0.709
AEH44542.1
TRAP transporter solute receptor, TAXI family; COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: nam:NAMH_0700 immunogenic protein; SPTR: Immunogenic protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; IMG reference gene:2505283958; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family.
  
     0.703
AEH45873.1
TRAP dicarboxylate transporter, DctM subunit; COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656:IPR004681; KEGG: rmr:Rmar_2648 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; IMG reference gene:2505285359; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
 
  
 0.578
AEH44424.1
Polar amino acid ABC transporter, inner membrane subunit; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: nam:NAMH_0587 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; IMG reference gene:2505283837; PFAM: Binding-protein-dependent transport system inner membrane compo [...]
       0.478
AEH44425.1
Polar amino acid ABC transporter, inner membrane subunit; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: nam:NAMH_0586 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; IMG reference gene:2505283838; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFA [...]
       0.478
AEH44426.1
ABC transporter related protein; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: nam:NAMH_0585 amino acid permease ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Amino acid permease ATP-binding protein; IMG reference gene:2505283839; PFAM: ABC transporter.
       0.478
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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