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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44450.1Phosphoesterase PA-phosphatase related protein; InterPro IPR000326; KEGG: min:Minf_1458 membrane-associated phospholipid phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: Membrane-associated phospholipid phosphatase; IMG reference gene:2505283863; PFAM: PAP2 superfamily. (198 aa)    
Predicted Functional Partners:
AEH44447.1
Protein of unknown function DUF190; COGs: COG1993 conserved hypothetical protein; InterPro IPR003793; KEGG: ddf:DEFDS_0610 hypothetical protein; PFAM: protein of unknown function DUF190; SPTR: Putative uncharacterized protein; IMG reference gene:2505283860; PFAM: Uncharacterized ACR, COG1993.
 
     0.816
AEH44449.1
Glycosyl transferase family 39; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: tye:THEYE_A0589 hypothetical protein; PFAM: glycosyl transferase family 39; SPTR: Putative uncharacterized protein; IMG reference gene:2505283862; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
    0.816
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.779
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.518
AEH44983.1
Eight transmembrane protein EpsH; InterPro IPR019127:IPR013426; KEGG: dde:Dde_0847 hypothetical protein; PFAM: Exosortase EpsH-related; SPTR: Membrane protein, putative; TIGRFAM: eight transmembrane protein EpsH; IMG reference gene:2505284422; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: eight transmembrane protein EpsH (proposed exosortase).
    
   0.459
AEH44984.1
EpsI family protein; InterPro IPR014263; KEGG: sus:Acid_6339 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: EpsI family protein; IMG reference gene:2505284423; PFAM: Protein of unknown function (DUF3485); TIGRFAM: EpsI family protein.
    
   0.459
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.443
AEH43992.1
Helicase domain protein; InterPro IPR006935:IPR001650:IPR014021:IPR014001; KEGG: tgr:Tgr7_3181 helicase domain protein; PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; SPTR: Helicase domain protein; IMG reference gene:2505283389; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
  
 
   0.439
AEH44977.1
Hypothetical protein; COGs: COG3893 Inactivated superfamily I helicase; KEGG: dsa:Desal_2713 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284416.
  
     0.432
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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