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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44491.1InterPro IPR013429; KEGG: dal:Dalk_1639 regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; SPTR: Regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; IMG reference gene:2505283905; PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family. (72 aa)    
Predicted Functional Partners:
AEH44492.1
SNARE associated Golgi protein-like protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: abu:Abu_2024 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: Conserved hypothetical integral membrane protein; IMG reference gene:2505283906; PFAM: SNARE associated Golgi protein.
       0.675
AEH44490.1
COGs: COG5483 conserved hypothetical protein; InterPro IPR014519; KEGG: tye:THEYE_A0530 hypothetical protein; SPTR: Conserved Archaeal protein; IMG reference gene:2505283904; PFAM: Protein of unknown function, DUF488.
       0.561
AEH44489.1
Metal dependent phosphohydrolase; COGs: COG1639 signal transduction protein; InterPro IPR013976:IPR003607; KEGG: dal:Dalk_3268 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; SPTR: Metal dependent phosphohydrolase; IMG reference gene:2505283903; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG.
       0.466
AEH44675.1
KEGG: gsu:GSU1874 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284094.
  
     0.444
AEH45079.1
KEGG: sat:SYN_00762 hypothetical protein; SPTR: Hypothetical membrane protein; IMG reference gene:2505284524.
  
     0.437
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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