Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEH44542.1TRAP transporter solute receptor, TAXI family; COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: nam:NAMH_0700 immunogenic protein; SPTR: Immunogenic protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; IMG reference gene:2505283958; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family. (323 aa)    
Predicted Functional Partners:
AEH44541.1
TRAP transporter, 4TM/12TM fusion protein; COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR010656:IPR011853; KEGG: nam:NAMH_0701 transporter; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Transporter; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; IMG reference gene:2505283957; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.
 
    0.971
AEH44430.1
Tripartite ATP-independent periplasmic transporter DctQ component; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: ddf:DEFDS_0771 C4-dicarboxylate transporter small subunit; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: C4-dicarboxylate transporter, small subunit; IMG reference gene:2505283843; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component.
  
     0.703
AEH44429.1
Extracellular solute-binding protein, family 7; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: ddf:DEFDS_0770 C4-dicarboxylate transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: C4-dicarboxylate transporter, substrate-binding protein; IMG reference gene:2505283842; PFAM: Bacterial extracellular solute-binding protein, family 7.
  
   
 0.492
AEH44431.1
TRAP dicarboxylate transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: ddf:DEFDS_0772 C4-dicarboxylate transporter large subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: C4-dicarboxylate transporter, large subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; IMG reference gene:2505283844; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
  
     0.415
speE
Spermine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
       0.413
AEH44540.1
S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
       0.413
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
Server load: low (24%) [HD]