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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44593.1Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017472:IPR017475; KEGG: hya:HY04AAS1_0831 undecaprenyl-phosphate galactose phosphotransferase, WbaP; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; IMG reference gene:2505284010; PFAM: Bacteri [...] (506 aa)    
Predicted Functional Partners:
AEH44764.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835:IPR001538:IPR006375; KEGG: saf:SULAZ_0358 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; PRIAM: Mannose-6-phosphate isomerase; SPTR: Strongly similar to GDP-mannose pyrophosphorylase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; IMG reference gene:2505284191; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomera [...]
 
  
 0.998
AEH45092.1
Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: dat:HRM2_19700 periplasmic polysaccharide export protein; PFAM: polysaccharide export protein; Soluble ligand binding domain; SPTR: Periplasmic polysaccharide export protein; IMG reference gene:2505284537; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; TIGRFAM: putative polysaccharide export protein, PEP-CTERM sytem-associated.
 
  
 0.991
AEH44592.1
DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: nis:NIS_1315 aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Aminotransferase; IMG reference gene:2505284009; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.986
AEH44328.1
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR020026:IPR000653; KEGG: msi:Msm_1536 pleiotropic regulatory protein DegT (PLP-dependent); PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; IMG reference gene:2505283735; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to t [...]
  
 0.976
AEH45088.1
COGs: COG0489 ATPase involved in chromosome partitioning; KEGG: dat:HRM2_19680 putative exopolysaccharide biosynthesis protein (protein-tyrosine kinase); SPTR: Putative exopolysaccharide biosynthesis protein (Protein-tyrosine kinase); IMG reference gene:2505284533.
 
  
 0.931
AEH44571.1
O-antigen polymerase; InterPro IPR007016; KEGG: sdl:Sdel_1811 O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: O-antigen polymerase; IMG reference gene:2505283987; PFAM: O-Antigen ligase.
  
  
 0.904
AEH45604.1
O-antigen polymerase; InterPro IPR007016; KEGG: ppd:Ppro_2455 O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: O-antigen polymerase; IMG reference gene:2505285071; PFAM: O-Antigen ligase; TIGRFAM: probable O-glycosylation ligase, exosortase system type 1-associated.
  
  
 0.904
AEH45090.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR014345:IPR003856; KEGG: dat:HRM2_19670 GumC1; PFAM: lipopolysaccharide biosynthesis protein; SPTR: GumC1; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; IMG reference gene:2505284535; PFAM: Chain length determinant protein; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
  
 0.874
AEH45932.1
COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: pat:Patl_4048 acetyltransferase; SPTR: Acetyltransferase (Isoleucine patch superfamily)-like; IMG reference gene:2505285420.
 
  
 0.865
AEH44614.1
Polysaccharide biosynthesis protein; InterPro IPR002797; KEGG: clj:CLJU_c05530 putative polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; IMG reference gene:2505284031; PFAM: Polysaccharide biosynthesis protein.
  
  
 0.858
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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