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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44645.1KEGG: dde:Dde_1000 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284064. (91 aa)    
Predicted Functional Partners:
AEH44643.1
Penicillin-binding protein, 1A family; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001264:IPR001460:IPR011816; KEGG: dak:DaAHT2_0246 penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; IMG reference gene:2505284062; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family.
       0.779
AEH44644.1
ABC transporter, ATPase, predicted; COGs: COG3044 ATPase of the ABC class; InterPro IPR019195; KEGG: cyh:Cyan8802_2553 ATPase family protein; PFAM: ABC transporter, ATPase, predicted; SPTR: ATPase family protein; IMG reference gene:2505284063; PFAM: Predicted ATPase of the ABC class.
       0.779
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
       0.543
AEH44647.1
Hypothetical protein; KEGG: dat:HRM2_46870 metal-binding protein; SPTR: Metal-binding protein; IMG reference gene:2505284066.
       0.543
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.543
AEH44649.1
Hypothetical protein; KEGG: sii:LD85_2436 helix-turn-helix, type 11 domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284068.
       0.404
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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