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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44663.1Rhomboid family protein; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: ddf:DEFDS_0217 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Rhomboid family protein; IMG reference gene:2505284082; PFAM: Rhomboid family. (246 aa)    
Predicted Functional Partners:
AEH44664.1
Hypothetical protein; COGs: COG0616 Periplasmic serine protease (ClpP class); KEGG: ddf:DEFDS_0218 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284083; PFAM: Serine dehydrogenase proteinase.
 
    0.792
AEH44915.1
Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: ddf:DEFDS_0015 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: N-acetylmuramoyl-L-alanine amidase; IMG reference gene:2505284354; PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes.
  
   0.579
AEH44662.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR003439:IPR013563:IPR003593:IPR017871:IPR 010066; KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; IMG reference gene:2505284081; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-te [...]
       0.558
tatA
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.510
AEH45116.1
Twin-arginine translocation protein, TatB subunit; COGs: COG1826 Sec-independent protein secretion pathway components; InterPro IPR018448:IPR003369:IPR003998; KEGG: sul:SYO3AOP1_1474 twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Twin-arginine translocation protein, TatB subunit; TIGRFAM: twin-arginine translocation protein, TatB subunit; IMG reference gene:2505284561; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin arginine-targeting protein translocase TatB.
   
 
 0.510
tatA-2
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.510
AEH44660.1
KEGG: ddf:DEFDS_0396 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284079; PFAM: PIN domain.
       0.443
AEH44661.1
Transcriptional regulator, AbrB family; InterPro IPR007159:IPR006339; KEGG: ddf:DEFDS_0395 hypothetical protein; PFAM: SpoVT/AbrB domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: transcriptional regulator, AbrB family; IMG reference gene:2505284080; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.
       0.443
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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