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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44665.1InterPro IPR008910; KEGG: par:Psyc_2091 hypothetical protein; PFAM: Conserved TM helix repeat-containing protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284084; PFAM: Conserved TM helix. (366 aa)    
Predicted Functional Partners:
AEH44534.1
KEGG: pca:Pcar_0017 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505283949.
   
    0.562
AEH44473.1
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR012766:IPR003337:IPR006379:IPR001830; KEGG: mem:Memar_2216 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; PFAM: glycosyl transferase family 20; trehalose-phosphatase; SPTR: Alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; IMG reference gene:2505283887; PFAM: Trehalose-phosphatase; Glycosyltransferase fami [...]
  
  
 0.520
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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