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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44670.1COGs: COG2834 Outer membrane lipoprotein-sorting protein; InterPro IPR018323:IPR004564; KEGG: dak:DaAHT2_0277 outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; SPTR: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: outer membrane lipoprotein carrier protein LolA; IMG reference gene:2505284089; PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA. (217 aa)    
Predicted Functional Partners:
AEH44671.1
Cell division protein FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541:IPR003593; KEGG: dal:Dalk_3204 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: Cell divisionFtsK/SpoIIIE; IMG reference gene:2505284090; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; EAP30/Vps36 family.
  
  
 0.850
nadA
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.791
AEH44672.1
KEGG: rpe:RPE_2580 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284091.
       0.779
AEH44486.1
Lipoprotein releasing system, transmembrane protein, LolC/E family; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR011925:IPR003838; KEGG: sfu:Sfum_3743 LolC/E family lipoprotein releasing system, transmembrane protein; PFAM: protein of unknown function DUF214; SPTR: Lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; IMG reference gene:2505283900; PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, Lol [...]
 
 
 
 0.772
AEH44668.1
4-alpha-glucanotransferase; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR015178:IPR004300:IPR015179; KEGG: tsi:TSIB_0455 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1925; Domain of unknown function DUF1926; PRIAM: 4-alpha-glucanotransferase; SPTR: Cyclodextrin glucanotransferase; IMG reference gene:2505284087; PFAM: Domain of unknown function (DUF1925); Glycosyl hydrolase family 57; Domain of unknown function (DUF1926).
       0.748
pal
Peptidoglycan-associated lipoprotein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664:IPR006665:IPR014169; KEGG: gme:Gmet_3541 OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: OmpA/MotB; TIGRFAM: peptidoglycan-associated lipoprotein; IMG reference gene:2505283371; PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family.
 
 
 0.647
AEH44915.1
Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: ddf:DEFDS_0015 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: N-acetylmuramoyl-L-alanine amidase; IMG reference gene:2505284354; PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes.
  
 
   0.643
AEH44203.1
ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dat:HRM2_17600 HTH-type transcriptional regulator; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: HTH-type transcriptional regulator; IMG reference gene:2505283608; PFAM: ABC transporter.
   
 
 0.616
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
   
 
 0.616
AEH45279.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.571
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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