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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44671.1Cell division protein FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541:IPR003593; KEGG: dal:Dalk_3204 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: Cell divisionFtsK/SpoIIIE; IMG reference gene:2505284090; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; EAP30/Vps36 family. (698 aa)    
Predicted Functional Partners:
AEH44670.1
COGs: COG2834 Outer membrane lipoprotein-sorting protein; InterPro IPR018323:IPR004564; KEGG: dak:DaAHT2_0277 outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; SPTR: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: outer membrane lipoprotein carrier protein LolA; IMG reference gene:2505284089; PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA.
  
  
 0.850
nadA
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.796
AEH44672.1
KEGG: rpe:RPE_2580 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284091.
       0.779
AEH44537.1
Protein of unknown function DUF1555; InterPro IPR003305:IPR011449:IPR013424; KEGG: mac:MA2808 hypothetical protein; PFAM: protein of unknown function DUF1555; Carbohydrate-binding CenC domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505283952; TIGRFAM: PEP-CTERM putative exosortase interaction domain.
   
 
 0.770
AEH44628.1
FG-GAP repeat protein; InterPro IPR013517; KEGG: afu:AF1946 cysteine proteinase, putative; PFAM: FG-GAP repeat protein; SPTR: PKD domain protein; IMG reference gene:2505284046; PFAM: FG-GAP repeat.
   
 
 0.770
AEH44668.1
4-alpha-glucanotransferase; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR015178:IPR004300:IPR015179; KEGG: tsi:TSIB_0455 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1925; Domain of unknown function DUF1926; PRIAM: 4-alpha-glucanotransferase; SPTR: Cyclodextrin glucanotransferase; IMG reference gene:2505284087; PFAM: Domain of unknown function (DUF1925); Glycosyl hydrolase family 57; Domain of unknown function (DUF1926).
       0.748
AEH44313.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
   
 
 0.738
AEH44051.1
DNA internalization-related competence protein ComEC/Rec2; COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR004477:IPR004797; KEGG: nwa:Nwat_0444 DNA internalization-like competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; SPTR: DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; IMG reference gene:2505283449; PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence p [...]
 
  
 0.700
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
  
 0.694
AEH44849.1
parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: dak:DaAHT2_2007 ParB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: Putative uncharacterized protein; TIGRFAM: parB-like partition protein; IMG reference gene:2505284286; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
  
  
 0.679
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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