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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44681.1Protein of unknown function DUF52; COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: sfu:Sfum_0075 hypothetical protein; PFAM: protein of unknown function DUF52; SPTR: Putative uncharacterized protein; IMG reference gene:2505284100; PFAM: Memo-like protein. (390 aa)    
Predicted Functional Partners:
AEH44680.1
ParB domain protein nuclease; InterPro IPR003115:IPR013838; KEGG: aae:aq_324 hypothetical protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: Putative uncharacterized protein; IMG reference gene:2505284099; PFAM: ParB-like nuclease domain.
 
     0.876
AEH44683.1
Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: drm:Dred_1326 hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284102; PFAM: Cysteine-rich domain.
  
    0.780
AEH44682.1
4Fe-4S ferredoxin, iron-sulfur binding protein; COGs: COG1150 Heterodisulfide reductase subunit C; InterPro IPR017896:IPR017900; KEGG: slp:Slip_2075 4Fe-4S ferredoxin, iron-sulfur binding protein; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding protein; manually curated; IMG reference gene:2505284101.
       0.779
AEH44729.1
AMMECR1 domain protein; COGs: COG2078 conserved hypothetical protein; InterPro IPR002733; KEGG: sfu:Sfum_1996 AMMECR1 domain-containing protein; PFAM: AMMECR1 domain protein; SPTR: AMMECR1 domain protein; IMG reference gene:2505284154; PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family.
    0.769
AEH45190.1
Protein of unknown function DUF52; COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: geo:Geob_3013 protein of unknown function DUF52; PFAM: protein of unknown function DUF52; SPTR: Putative uncharacterized protein; IMG reference gene:2505284637; PFAM: Memo-like protein; Belongs to the MEMO1 family.
  
     0.736
AEH45768.1
Radical SAM domain protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR016431:IPR007197; KEGG: dak:DaAHT2_1232 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; IMG reference gene:2505285248; PFAM: Radical SAM superfamily.
 
     0.678
AEH44496.1
Radical SAM domain protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR016431:IPR007197; KEGG: mtp:Mthe_1490 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; IMG reference gene:2505283910; PFAM: Radical SAM superfamily.
 
     0.636
AEH44684.1
COGs: COG1452 Organic solvent tolerance protein OstA; InterPro IPR007543; KEGG: drt:Dret_1088 organic solvent tolerance protein; PFAM: Organic solvent tolerance protein; SPTR: Organic solvent tolerance protein; IMG reference gene:2505284103; PFAM: Organic solvent tolerance protein.
       0.594
AEH44678.1
Protein of unknown function DUF505; COGs: COG1542 conserved hypothetical protein; InterPro IPR007548; KEGG: ttr:Tter_1487 protein of unknown function DUF505; PFAM: protein of unknown function DUF505; SPTR: Putative uncharacterized protein; IMG reference gene:2505284097; PFAM: Protein of unknown function (DUF505).
 
     0.561
AEH44679.1
KEGG: aae:aq_755 hypothetical protein; SPTR: Uncharacterized protein aq_755; IMG reference gene:2505284098.
       0.436
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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