close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44704.1Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: afu:AF1615 cofactor modifying protein (cmo); PFAM: Radical SAM domain protein; SPTR: Cofactor modifying protein (Cmo); IMG reference gene:2505284123; PFAM: Radical SAM superfamily. (339 aa)    
Predicted Functional Partners:
AEH44703.1
KEGG: tna:CTN_1090 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284122.
       0.569
AEH44212.1
Hypothetical protein; InterPro IPR020327; KEGG: afu:AF1562 hypothetical protein; SPTR: Uncharacterized protein AF_1562; IMG reference gene:2505283618.
  
     0.535
AEH45465.1
KEGG: dat:HRM2_41330 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284927.
  
     0.528
AEH44750.1
uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR000878:IPR003754:IPR003043:IPR006366; KEGG: dal:Dalk_4009 uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; IMG reference gene:2505284177; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase.
  
  
 0.489
AEH44906.1
KEGG: dvl:Dvul_2509 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284345.
  
     0.438
AEH44321.1
PASTA domain containing protein; InterPro IPR005543; KEGG: tle:Tlet_1434 peptidoglycan glycosyltransferase; PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein; SPTR: Peptidoglycan glycosyltransferase; IMG reference gene:2505283728; PFAM: Penicillin binding protein transpeptidase domain; PASTA domain.
  
     0.433
AEH44702.1
COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: gur:Gura_1633 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: Cyclopropane-fatty-acyl-phospholipid synthase; IMG reference gene:2505284121; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase.
  
    0.415
AEH45852.1
KEGG: scl:sce3839 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505285335.
  
     0.412
AEH44297.1
InterPro IPR018383; KEGG: drt:Dret_0966 uncharacterized protein family UPF0324; PFAM: Uncharacterised protein family UPF0324; SPTR: Uncharacterized protein family UPF0324; IMG reference gene:2505283704; PFAM: Conserved hypothetical protein 698.
  
    0.408
AEH45306.1
Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR006158:IPR007197; KEGG: gbm:Gbem_1024 Radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; IMG reference gene:2505284760; PFAM: Radical SAM superfamily; B12 binding domain.
  
  
 0.408
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.