Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AEH44720.1Hypothetical protein; COGs: COG0348 Polyferredoxin; InterPro IPR017896:IPR017900; KEGG: gsu:GSU0729 iron-sulfur cluster-binding protein; SPTR: Iron-sulfur cluster-binding protein; IMG reference gene:2505284145. (241 aa)    
Predicted Functional Partners:
AEH44719.1
InterPro IPR003735; KEGG: cpb:Cphamn1_0277 protein of unknown function DUF156; PFAM: protein of unknown function DUF156; SPTR: Putative uncharacterized protein; IMG reference gene:2505284144; PFAM: Uncharacterised BCR, COG1937.
       0.778
AEH46070.1
Hypothetical protein; InterPro IPR017900:IPR017896; KEGG: dap:Dacet_0088 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; manually curated; IMG reference gene:2505285561; TIGRFAM: ferredoxin-type protein NapF; MauM/NapG family ferredoxin-type protein.
 
    0.588
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
       0.542
AEH46073.1
Multiheme C-type cytochrome; InterPro IPR011031; KEGG: ddf:DEFDS_1819 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; IMG reference gene:2505285564; PFAM: Class III cytochrome C family.
 
     0.422
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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