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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44734.1Transposase IS116/IS110/IS902 family protein; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: sul:SYO3AOP1_1339 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Transposase and inactivated derivative; IMG reference gene:2505284159; PFAM: Transposase IS116/IS110/IS902 family; Transposase. (322 aa)    
Predicted Functional Partners:
AEH44733.1
Hypothetical protein; IMG reference gene:2505284158.
       0.773
AEH44735.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734:IPR013026:IPR001440:IPR003107; KEGG: dat:HRM2_20780 tetratricopeptide (TPR) domain protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide (TPR) domain protein; IMG reference gene:2505284160; PFAM: Tetratricopeptide repeat; PPR repeat.
       0.432
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.432
trmFO
Gid protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.
       0.432
AEH44738.1
Hypothetical protein; KEGG: sth:STH1731 cytochrome c biogenesis protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284163.
       0.432
AEH44731.1
COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192:IPR020578; KEGG: tna:CTN_1191 aspartate aminotransferase; PFAM: aminotransferase class V; SPTR: Serine--glyoxylate transaminase; IMG reference gene:2505284156; PFAM: Aminotransferase class-V.
       0.425
AEH44732.1
COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR002912:IPR006236; KEGG: dak:DaAHT2_0597 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; IMG reference gene:2505284157; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D- [...]
       0.425
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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