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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44798.1COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: chy:CHY_1063 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033563; SPTR: Putative uncharacterized protein; IMG reference gene:2505284230; PFAM: Protein of unknown function (DUF1015). (428 aa)    
Predicted Functional Partners:
AEH44799.1
KEGG: apo:Arcpr_0951 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284231.
       0.791
AEH44800.1
COGs: COG0840 Methyl-accepting chemotaxis protein; InterProIPR016131:IPR004089:IPR004090:IPR003660:IPR 012312:IPR012827; KEGG: mgm:Mmc1_0310 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Hemerythrin HHE cation binding domain protein; SMART: chemotaxis sensory transducer; SPTR: Methyl-accepting chemotaxis sensory transducer; TIGRFAM: hemerythrin-like metal-binding protein; IMG reference gene:2505284232; PFAM: Hemerythrin HHE cation binding domain; Methyl-accepting chemotaxis protein (MCP) signaling domai [...]
       0.504
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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