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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44840.1InterPro IPR000326; KEGG: pin:Ping_1712 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: Phosphoesterase, PA-phosphatase related; IMG reference gene:2505284276; PFAM: PAP2 superfamily. (181 aa)    
Predicted Functional Partners:
AEH44839.1
Hypothetical protein; COGs: COG1085 Galactose-1-phosphate uridylyltransferase; KEGG: sfu:Sfum_1834 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284275.
       0.705
pyrK
Oxidoreductase FAD/NAD(P)-binding domain protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
    0.577
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.518
AEH44838.1
Hypothetical protein; KEGG: smm:Smp_160620.1 subfamily M12B unassigned peptidase (M12 family); SPTR: Subfamily M12B unassigned peptidase (M12 family); IMG reference gene:2505284274.
       0.468
AEH44983.1
Eight transmembrane protein EpsH; InterPro IPR019127:IPR013426; KEGG: dde:Dde_0847 hypothetical protein; PFAM: Exosortase EpsH-related; SPTR: Membrane protein, putative; TIGRFAM: eight transmembrane protein EpsH; IMG reference gene:2505284422; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: eight transmembrane protein EpsH (proposed exosortase).
    
   0.459
AEH44984.1
EpsI family protein; InterPro IPR014263; KEGG: sus:Acid_6339 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: EpsI family protein; IMG reference gene:2505284423; PFAM: Protein of unknown function (DUF3485); TIGRFAM: EpsI family protein.
    
   0.459
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.443
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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