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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44854.1Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR017871:IPR003593:IPR003439:IPR013563:IPR 010066; KEGG: apo:Arcpr_0086 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; IMG reference gene:2505284291; PFAM: ABC transporter; Oligopeptide/dipeptide tr [...] (312 aa)    
Predicted Functional Partners:
AEH44855.1
COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: apo:Arcpr_0087 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2505284292; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.996
AEH44004.1
COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sat:SYN_01342 oligopeptide transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Oligopeptide transport system permease protein; IMG reference gene:2505283401; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.985
AEH45518.1
COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: kcr:Kcr_0931 ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, permease protein; IMG reference gene:2505284981; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.981
AEH44856.1
COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: fpl:Ferp_1497 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2505284293; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.968
AEH45519.1
COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dae:Dtox_0449 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, permease protein; IMG reference gene:2505284982; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.875
AEH44003.1
COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: gme:Gmet_1235 binding-protein dependent transport system inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2505283400; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.866
AEH44857.1
Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: apo:Arcpr_0089 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: Extracellular solute-binding protein family 5; IMG reference gene:2505284294; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
  
 0.850
AEH45237.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: nde:NIDE3338 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type multidrug transport system, ATPase component; manually curated; IMG reference gene:2505284686; PFAM: ABC transporter.
    
0.830
AEH44853.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR017871:IPR003593:IPR003439:IPR013563:IPR 010066; KEGG: apo:Arcpr_0085 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; IMG reference gene:2505284290; PFAM: ABC transporter; Oligopeptide/dipeptide tr [...]
 
    
0.808
AEH45520.1
Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: dae:Dtox_0450 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: Extracellular solute-binding protein family 5; IMG reference gene:2505284983; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
  
 0.664
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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