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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44951.1Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: sfu:Sfum_0384 ABC transporter related; PFAM: inner-membrane translocator; SPTR: ABC transporter related; IMG reference gene:2505284390; PFAM: Branched-chain amino acid transport system / permease component. (313 aa)    
Predicted Functional Partners:
AEH44950.1
Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: dvm:DvMF_1483 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; IMG reference gene:2505284389; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.998
AEH45933.1
ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dol:Dole_0836 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter-related protein; IMG reference gene:2505285421; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
  
 0.981
AEH45028.1
ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: ddf:DEFDS_0657 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Branched-chain amino acid ABC transporter, ATP-binding protein; IMG reference gene:2505284471; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
  
 0.971
AEH45934.1
ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: glo:Glov_1865 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; IMG reference gene:2505285422; PFAM: ABC transporter.
  
 0.966
AEH44134.1
Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: gsu:GSU1733 branched-chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease protein; IMG reference gene:2505283534; PFAM: Branched-chain amino acid transport system / permease component.
  
 0.965
AEH45714.1
ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: mvu:Metvu_0681 ABC transporter releated protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter releated protein; IMG reference gene:2505285188; PFAM: ABC transporter.
  
 0.923
AEH45713.1
ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: mvu:Metvu_0680 ABC transporter releated protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Probable branched-chain amino acid transport ATP-binding protein livF; IMG reference gene:2505285187; PFAM: ABC transporter.
  
 0.914
AEH45712.1
Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: mfs:MFS40622_0662 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; IMG reference gene:2505285186; PFAM: Branched-chain amino acid transport system / permease component.
 
  
 0.888
AEH44440.1
Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828:IPR000709; KEGG: dvm:DvMF_1478 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; IMG reference gene:2505283853; PFAM: Receptor family ligand binding region.
  
  
 0.852
AEH44135.1
Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709:IPR001828; KEGG: gsu:GSU1734 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative; IMG reference gene:2505283535; PFAM: Receptor family ligand binding region.
  
  
 0.851
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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