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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH44953.1COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: bts:Btus_0502 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; IMG reference gene:2505284392; PFAM: Polysaccharide deacetylase. (273 aa)    
Predicted Functional Partners:
AEH44952.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ank:AnaeK_1445 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; IMG reference gene:2505284391; PFAM: Glycosyl transferases group 1.
  
    0.780
AEH44954.1
Hypothetical protein; InterPro IPR005242; KEGG: geo:Geob_3377 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284393; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
  
    0.780
AEH44569.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: hsm:HSM_0164 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase, family 2; IMG reference gene:2505283985; PFAM: Glycosyl transferase family 2.
  
  
 0.593
AEH44586.1
FemAB-related protein, PEP-CTERM system-associated; COGs: COG5653 Protein involved in cellulose biosynthesis (CelD); InterPro IPR003447:IPR017469; KEGG: geo:Geob_2975 FemAB-related protein, PEP-Cterm system-associated; SPTR: Putative uncharacterized protein; TIGRFAM: FemAB-related protein, PEP-CTERM system-associated; IMG reference gene:2505284003; PFAM: FemAB family; TIGRFAM: FemAB-related protein, PEP-CTERM system-associated.
 
   
 0.561
AEH44950.1
Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: dvm:DvMF_1483 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; IMG reference gene:2505284389; PFAM: Branched-chain amino acid transport system / permease component.
       0.523
AEH44951.1
Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: sfu:Sfum_0384 ABC transporter related; PFAM: inner-membrane translocator; SPTR: ABC transporter related; IMG reference gene:2505284390; PFAM: Branched-chain amino acid transport system / permease component.
       0.523
AEH44948.1
Response regulator receiver sensor hybrid histidine kinase; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR020053:IPR001789:IPR003661:IPR003594:IPR 004358:IPR005467; KEGG: cts:Ctha_2310 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SPTR: Putative Histidine kinase; IMG reference gene:2505284387; PFAM: Histidine [...]
 
     0.522
AEH44949.1
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: hmo:HM1_3019 nitroreductase family protein; PFAM: nitroreductase; SPTR: Nitroreductase family protein; IMG reference gene:2505284388; PFAM: Nitroreductase family.
  
    0.473
AEH44955.1
Selenium metabolism protein YedF; InterPro IPR001455:IPR019870; KEGG: drm:Dred_1242 SirA family protein; PFAM: SirA-like domain-containing protein; SPTR: Transcriptional regulator; TIGRFAM: selenium metabolism protein YedF; IMG reference gene:2505284394; PFAM: DsrE/DsrF-like family; SirA-like protein; TIGRFAM: selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
       0.451
AEH44956.1
Cysteine desulfurase family protein; COGs: COG0520 Selenocysteine lyase; InterPro IPR020578:IPR000192:IPR010969; KEGG: sat:SYN_01071 cysteine desulfurase / selenocysteine lyase; PFAM: aminotransferase class V; SPTR: Cysteine desulfurase / selenocysteine lyase; TIGRFAM: cysteine desulfurase family protein; IMG reference gene:2505284395; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein.
       0.451
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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