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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH45051.1KEGG: nam:NAMH_0673 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284494. (367 aa)    
Predicted Functional Partners:
AEH45050.1
Radical SAM domain protein; COGs: COG4277 DNA-binding protein with the Helix-hairpin-helix motif; InterPro IPR006638:IPR003583:IPR007197:IPR000445; KEGG: dth:DICTH_1688 radical SAM; PFAM: Radical SAM domain protein; helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; Elongator protein 3/MiaB/NifB; SPTR: Radical SAM; IMG reference gene:2505284493; PFAM: Radical SAM superfamily; Helix-hairpin-helix motif.
       0.655
AEH45052.1
InterPro IPR000326; KEGG: hth:HTH_0940 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: Phosphoesterase, PA-phosphatase related; IMG reference gene:2505284495; PFAM: PAP2 superfamily.
       0.553
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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