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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH45368.1KEGG: afn:Acfer_1949 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284825. (74 aa)    
Predicted Functional Partners:
AEH45367.1
KEGG: nde:NIDE3988 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284824.
       0.526
AEH45369.1
KEGG: vsp:VS_1096 cell division protein MukB; SPTR: Possible exodeoxyribonuclease V gamma chain; IMG reference gene:2505284826.
       0.444
AEH45370.1
Hypothetical protein; KEGG: cbf:CLI_3874 putative R-2-hydroxyglutaryl-CoA dehydratase subunit; SPTR: 2-hydroxyglutaryl-CoA dehydratase, D-component; IMG reference gene:2505284827.
       0.444
AEH45371.1
KEGG: dae:Dtox_3705 phage protein; SPTR: Phage replication protein; IMG reference gene:2505284828.
       0.400
AEH45372.1
KEGG: ckr:CKR_0097 hypothetical protein; SPTR: Altronate dehydratase; IMG reference gene:2505284829.
       0.400
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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