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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH45405.1KEGG: dba:Dbac_2225 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284863; PFAM: Protein of unknown function (DUF1329). (252 aa)    
Predicted Functional Partners:
AEH45403.1
Patched family protein; COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: dba:Dbac_2229 patched family protein; SPTR: Patched; IMG reference gene:2505284861; PFAM: MMPL family.
  
 0.956
AEH45404.1
KEGG: dba:Dbac_2226 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284862.
 
     0.942
AEH45406.1
KEGG: sfu:Sfum_0603 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284864.
       0.658
AEH44486.1
Lipoprotein releasing system, transmembrane protein, LolC/E family; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR011925:IPR003838; KEGG: sfu:Sfum_3743 LolC/E family lipoprotein releasing system, transmembrane protein; PFAM: protein of unknown function DUF214; SPTR: Lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; IMG reference gene:2505283900; PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, Lol [...]
   
 
 0.649
AEH44203.1
ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dat:HRM2_17600 HTH-type transcriptional regulator; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: HTH-type transcriptional regulator; IMG reference gene:2505283608; PFAM: ABC transporter.
   
 
 0.616
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
   
 
 0.616
AEH44915.1
Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: ddf:DEFDS_0015 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: N-acetylmuramoyl-L-alanine amidase; IMG reference gene:2505284354; PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes.
    
   0.581
pal
Peptidoglycan-associated lipoprotein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664:IPR006665:IPR014169; KEGG: gme:Gmet_3541 OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: OmpA/MotB; TIGRFAM: peptidoglycan-associated lipoprotein; IMG reference gene:2505283371; PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family.
  
 
 0.558
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
       0.504
AEH45408.1
Protein of unknown function DUF763; COGs: COG1415 conserved hypothetical protein; InterPro IPR008482; KEGG: mta:Moth_0136 hypothetical protein; PFAM: protein of unknown function DUF763; SPTR: Putative uncharacterized protein; IMG reference gene:2505284866; PFAM: Protein of unknown function (DUF763).
       0.488
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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