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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH45432.1KEGG: lch:Lcho_1314 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284891. (228 aa)    
Predicted Functional Partners:
AEH45431.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
     0.757
AEH45434.1
Restriction modification system DNA specificity domain protein; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: hin:HI1286 type I restriction/modification specificity protein; PFAM: restriction modification system DNA specificity domain; SPTR: Restriction modification system DNA specificity domain protein; IMG reference gene:2505284893; PFAM: Type I restriction modification DNA specificity domain.
 
     0.609
AEH45433.1
KEGG: kol:Kole_1274 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284892.
       0.517
AEH45435.1
InterPro IPR000209; KEGG: bbr:BB0911 putative serine protease; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Subtilisin-like serine protease P4; IMG reference gene:2505284894; PFAM: Subtilase family.
       0.517
AEH45436.1
AAA ATPase central domain protein; COGs: COG1223 ATPase (AAA+ superfamily); InterPro IPR003593:IPR003959; KEGG: bbr:BB0910 putative ATPase; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: Putative ATPase; IMG reference gene:2505284895; PFAM: ATPase family associated with various cellular activities (AAA).
       0.517
AEH45438.1
Site-specific DNA-methyltransferase (adenine-specific); COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002296:IPR002052:IPR003356; KEGG: chl:Chy400_1958 N-6 DNA methylase; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: N-6 DNA methylase; IMG reference gene:2505284897; PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM).
 
     0.432
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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