Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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AEH45449.1Cytochrome c-type forming protein Ccs1; COGs: COG1333 ResB protein required for cytochrome c biosynthesis; KEGG: dps:DP1682 cytochrome c-type forming protein Ccs1; SPTR: Related to cytochrome c-type forming protein Ccs1; IMG reference gene:2505284910; PFAM: ResB-like family. (443 aa)    
Predicted Functional Partners:
AEH44947.1
COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003557:IPR002541:IPR017562; KEGG: sfu:Sfum_0695 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: Probable cytochrome c biogenesis protein (CcsA); TIGRFAM: cytochrome c-type biogenesis protein CcsB; IMG reference gene:2505284386; PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB.
 
  
 0.927
AEH45281.1
COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR017562:IPR002541; KEGG: gme:Gmet_3232 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; IMG reference gene:2505284730; PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB.
 
  
 0.924
tatA-2
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
    0.785
AEH44750.1
uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR000878:IPR003754:IPR003043:IPR006366; KEGG: dal:Dalk_4009 uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; IMG reference gene:2505284177; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase.
  
    0.769
AEH45447.1
COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: dat:HRM2_28110 putative purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: Putative purine nucleoside phosphorylase; IMG reference gene:2505284908; PFAM: Phosphorylase superfamily.
 
     0.623
thrS
COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR018158:IPR002320:IPR006195:IPR004095:IPR 012947:IPR002314:IPR004154; KEGG: dak:DaAHT2_1245 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; SPTR: Threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; IMG reference gene:2505284914; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synt [...]
  
    0.505
infC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
       0.498
AEH45783.1
KEGG: ppd:Ppro_0260 protein-disulfide isomerase; SPTR: Protein-disulfide isomerase; IMG reference gene:2505285264.
 
     0.488
AEH45458.1
COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: dar:Daro_1327 integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Integration host factor subunit alpha 1; IMG reference gene:2505284920; PFAM: Bacterial DNA-binding protein; Belongs to the bacterial histone-like protein family.
 
 
   0.480
AEH45118.1
Cytochrome c, class III, conserved region; InterPro IPR020942:IPR002322:IPR011031; KEGG: tye:THEYE_A1056 cytochrome c3 chain A; PFAM: Cytochrome c, class III, conserved region; SPTR: Chain A, Cytochrome C3 From Desulfomicrobium Baculatus; IMG reference gene:2505284563; PFAM: Class III cytochrome C family.
 
     0.466
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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