Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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AEH45740.1AAA ATPase; COGs: COG3267 Type II secretory pathway component ExeA (predicted ATPase); InterPro IPR003593; KEGG: pmx:PERMA_0968 peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; SPTR: General secretion pathway protein, ATPase; IMG reference gene:2505285215; PFAM: Archaeal ATPase. (305 aa)    
Predicted Functional Partners:
AEH45736.1
Type II and III secretion system protein; COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR001775:IPR004846; KEGG: pmx:PERMA_0972 putative pilus; PFAM: type II and III secretion system protein; SPTR: Putative type II secretion system protein; IMG reference gene:2505285211; PFAM: Bacterial type II and III secretion system protein; TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family; pilus (MSHA type) biogenesis protein MshL; Belongs to the bacterial secretin family.
 
    0.821
AEH45742.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR007831:IPR003593; KEGG: pmx:PERMA_0977 type IV pilus assembly protein TapB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2505285217; PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein.
     
 0.784
AEH45739.1
InterPro IPR007813; KEGG: xfn:XfasM23_1788 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505285214.
       0.779
AEH45741.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004:IPR018076; KEGG: pmx:PERMA_0978 putative type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Putative type II secretion system protein; IMG reference gene:2505285216; PFAM: Bacterial type II secretion system protein F domain.
  
    0.779
AEH45737.1
Hypothetical protein; KEGG: uue:UUR10_0551 fibronectin repeat protein; SPTR: Alpha-/beta-galactoside alpha-2,3-sialyltransferase; IMG reference gene:2505285212.
       0.778
AEH45738.1
Hypothetical protein; KEGG: pfh:PFHG_03359 conserved hypothetical protein; SPTR: Chromosome undetermined scaffold_38, whole genome shotgun sequence; IMG reference gene:2505285213.
       0.778
AEH45735.1
Hypothetical protein; InterPro IPR019734:IPR013026; KEGG: pfh:PFHG_03301 conserved hypothetical protein; SPTR: Pterin-4-alpha-carbinolamine dehydratase family protein; IMG reference gene:2505285210.
       0.734
AEH45743.1
Putative Ig family protein; InterPro IPR005829:IPR001120:IPR012902; KEGG: pmx:PERMA_0970 putative Ig family protein; SPTR: Putative Ig family protein; IMG reference gene:2505285218; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
    0.660
AEH45090.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR014345:IPR003856; KEGG: dat:HRM2_19670 GumC1; PFAM: lipopolysaccharide biosynthesis protein; SPTR: GumC1; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; IMG reference gene:2505284535; PFAM: Chain length determinant protein; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
     0.611
AEH44586.1
FemAB-related protein, PEP-CTERM system-associated; COGs: COG5653 Protein involved in cellulose biosynthesis (CelD); InterPro IPR003447:IPR017469; KEGG: geo:Geob_2975 FemAB-related protein, PEP-Cterm system-associated; SPTR: Putative uncharacterized protein; TIGRFAM: FemAB-related protein, PEP-CTERM system-associated; IMG reference gene:2505284003; PFAM: FemAB family; TIGRFAM: FemAB-related protein, PEP-CTERM system-associated.
 
     0.560
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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