Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
AEH45822.1PilT protein domain protein; InterPro IPR002716:IPR006596; KEGG: saf:SULAZ_0262 putative PIN domain protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; SPTR: Putative PIN domain protein; IMG reference gene:2505285304; PFAM: PIN domain. (166 aa)    
Predicted Functional Partners:
AEH45794.1
KEGG: lbl:LBL_0974 ribbon-helix-helix protein; SPTR: Ribbon-helix-helix protein; IMG reference gene:2505285275; PFAM: Ribbon-helix-helix protein, copG family.
   
   0.801
AEH45823.1
Hypothetical protein; KEGG: mdo:100026581 similar to ATP-binding cassette transporter sub-family A member 14; SPTR: Putative uncharacterized protein; IMG reference gene:2505285305.
       0.778
AEH45824.1
KEGG: tps:THAPSDRAFT_36310 hypothetical protein; SPTR: Predicted protein; IMG reference gene:2505285306.
       0.473
AEH45825.1
KEGG: hps:HPSH_02420 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505285307; PFAM: Protein of unknown function DUF88.
       0.451
AEH45826.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: rha:RHA1_ro11274 repressor protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative transcription regulator; IMG reference gene:2505285308; PFAM: Helix-turn-helix.
       0.451
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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