rpsT protein (Thermodesulfatator indicus) - STRING interaction network

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rpsT

Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (94 aa)

Predicted Functional Partners:

rpmB

0.990

rplM

0.990

rpsU

0.989

rplU

0.989

rpmF

0.989

rpsI

0.988

rpmE

0.985

rpsP

0.985

rpsO

0.985

rpmH

0.983

Your Current Organism:

Thermodesulfatator indicus

NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	Thein_1373	Thein_0885	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.991
rplM	rpmB	Thein_1373	Thein_0580	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L28; InterPro IPR001383; KEGG: kol:Kole_1660 ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; IMG reference gene:2505283875; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.988
rplM	rpmE	Thein_1373	Thein_0553	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L31; Binds the 23S rRNA.	0.967
rplM	rpmF	Thein_1373	Thein_1722	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COGs: COG0333 Ribosomal protein L32; InterPro IPR002677; KEGG: gur:Gura_1873 50S ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: LSU ribosomal protein L32P; TIGRFAM: ribosomal protein L32; IMG reference gene:2505285047; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.987
rplM	rpmH	Thein_1373	Thein_0635	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L34; InterPro IPR000271:IPR020939; KEGG: tme:Tmel_1628 50S ribosomal protein L34; PFAM: ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; IMG reference gene:2505283930; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family.	0.977
rplM	rpsI	Thein_1373	Thein_1374	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COGs: COG0103 Ribosomal protein S9; InterPro IPR000754:IPR020574; KEGG: dak:DaAHT2_0353 ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: 30S ribosomal protein S9; IMG reference gene:2505284689; PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	Thein_1373	Thein_1642	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.992
rplM	rpsP	Thein_1373	Thein_1241	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COGs: COG0228 Ribosomal protein S16; InterPro IPR000307; KEGG: csc:Csac_2157 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; IMG reference gene:2505284554; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.989
rplM	rpsT	Thein_1373	Thein_2013	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.990
rplM	rpsU	Thein_1373	Thein_0037	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S21; InterPro IPR001911:IPR018278; KEGG: ppd:Ppro_3053 30S ribosomal protein S21; PFAM: ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; IMG reference gene:2505283319; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.984
rplU	rplM	Thein_0885	Thein_1373	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.991
rplU	rpmB	Thein_0885	Thein_0580	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L28; InterPro IPR001383; KEGG: kol:Kole_1660 ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; IMG reference gene:2505283875; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.990
rplU	rpmE	Thein_0885	Thein_0553	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L31; Binds the 23S rRNA.	0.981
rplU	rpmF	Thein_0885	Thein_1722	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COGs: COG0333 Ribosomal protein L32; InterPro IPR002677; KEGG: gur:Gura_1873 50S ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: LSU ribosomal protein L32P; TIGRFAM: ribosomal protein L32; IMG reference gene:2505285047; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.991
rplU	rpmH	Thein_0885	Thein_0635	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L34; InterPro IPR000271:IPR020939; KEGG: tme:Tmel_1628 50S ribosomal protein L34; PFAM: ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; IMG reference gene:2505283930; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family.	0.980
rplU	rpsI	Thein_0885	Thein_1374	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COGs: COG0103 Ribosomal protein S9; InterPro IPR000754:IPR020574; KEGG: dak:DaAHT2_0353 ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: 30S ribosomal protein S9; IMG reference gene:2505284689; PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.	0.990
rplU	rpsO	Thein_0885	Thein_1642	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.984
rplU	rpsP	Thein_0885	Thein_1241	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COGs: COG0228 Ribosomal protein S16; InterPro IPR000307; KEGG: csc:Csac_2157 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; IMG reference gene:2505284554; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.990
rplU	rpsT	Thein_0885	Thein_2013	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.989
rplU	rpsU	Thein_0885	Thein_0037	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S21; InterPro IPR001911:IPR018278; KEGG: ppd:Ppro_3053 30S ribosomal protein S21; PFAM: ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; IMG reference gene:2505283319; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.987

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