Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH45908.1Lysine 2,3-aminomutase YodO family protein; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR003739:IPR007197; KEGG: kol:Kole_1669 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; PRIAM: Lysine 2,3-aminomutase; SPTR: Lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; IMG reference gene:2505285395; PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein. (381 aa)    
Predicted Functional Partners:
AEH44268.1
COGs: COG1794 Aspartate racemase; InterPro IPR004380:IPR015942:IPR018187; KEGG: sdn:Sden_1375 aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: Aspartate racemase; TIGRFAM: aspartate racemase; IMG reference gene:2505283675; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase; Belongs to the aspartate/glutamate racemases family.
     
  0.900
AEH44231.1
MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: psl:Psta_3345 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: MCP methyltransferase, CheR-type; IMG reference gene:2505283637; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.
    
   0.816
AEH44027.1
Orn/DAP/Arg decarboxylase 2; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183; KEGG: pmx:PERMA_0884 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Diaminopimelate decarboxylase; IMG reference gene:2505283425; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain.
     
 0.803
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.803
AEH45909.1
PHP domain protein; COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR004013:IPR003141; KEGG: dal:Dalk_3059 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: PHP domain protein; IMG reference gene:2505285396; PFAM: PHP domain.
       0.651
AEH45906.1
Flavodoxin/nitric oxide synthase; COGs: COG0426 flavoprotein; InterPro IPR016440:IPR008254; KEGG: dak:DaAHT2_2067 flavodoxin/nitric oxide synthase; PFAM: flavodoxin/nitric oxide synthase; SPTR: Flavodoxin/nitric oxide synthase; IMG reference gene:2505285393; PFAM: Flavodoxin; Metallo-beta-lactamase superfamily.
       0.485
AEH45907.1
KEGG: dal:Dalk_2376 hypothetical protein; SPTR: HEAT; IMG reference gene:2505285394.
       0.485
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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