STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH45920.1COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit; InterPro IPR003813; KEGG: adg:Adeg_1332 methyl-viologen-reducing hydrogenase delta subunit; PFAM: methyl-viologen-reducing hydrogenase delta subunit; SPTR: Methyl-viologen-reducing hydrogenase delta subunit; IMG reference gene:2505285407; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit. (144 aa)    
Predicted Functional Partners:
AEH45635.1
FAD dependent oxidoreductase; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR017896:IPR017900:IPR006076; KEGG: apo:Arcpr_1555 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: FAD dependent oxidoreductase; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; manually curated; selenocysteine-containing protein; IMG reference gene:2505285105; PFAM: 4Fe-4S binding domain.
 
 0.986
AEH45919.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterProIPR013027:IPR017900:IPR006076:IPR003953:IPR 017896; KEGG: adg:Adeg_1885 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; IMG reference gene:2505285406; PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase.
   0.981
AEH44168.1
FAD dependent oxidoreductase; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR006076:IPR017900; KEGG: dal:Dalk_1568 heterodisulfide reductase, subunit A (HdrA); PFAM: FAD dependent oxidoreductase; SPTR: Heterodisulfide reductase, subunit A (HdrA); IMG reference gene:2505283573; PFAM: FAD dependent oxidoreductase.
 
   0.965
AEH45921.1
InterPro IPR017900:IPR017896; KEGG: sfu:Sfum_1972 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; IMG reference gene:2505285408; PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.
     0.959
AEH46037.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterProIPR013027:IPR006076:IPR003953:IPR017900:IPR 017896; KEGG: dak:DaAHT2_2650 fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; SPTR: Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; manually curated; selenocysteine-containing protein; IMG reference gene:2505285526; PFAM: Pyridine nu [...]
 
   0.921
AEH45922.1
InterPro IPR017900:IPR017896; KEGG: slp:Slip_2070 4Fe-4S ferredoxin, iron-sulfur binding protein; SPTR: Ferredoxin; IMG reference gene:2505285409.
 
 
 0.899
AEH44683.1
Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: drm:Dred_1326 hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284102; PFAM: Cysteine-rich domain.
 
 
 0.898
AEH45923.1
Oxidoreductase FAD/NAD(P)-binding domain protein; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR001834:IPR012165:IPR008333:IPR001433:IPR 019480:IPR017927; KEGG: dae:Dtox_1281 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: Oxidoreductase FAD/NAD(P)-binding domain protein; IMG reference gene:2505285410; PFAM: Oxidoreductase FAD-binding domai [...]
 
 
 0.887
AEH45637.1
COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: apo:Arcpr_1553 CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: CoB--CoM heterodisulfide reductase; IMG reference gene:2505285107; PFAM: Cysteine-rich domain; TIGRFAM: CoB--CoM heterodisulfide reductase, subunit B.
 
 
 0.856
AEH44682.1
4Fe-4S ferredoxin, iron-sulfur binding protein; COGs: COG1150 Heterodisulfide reductase subunit C; InterPro IPR017896:IPR017900; KEGG: slp:Slip_2075 4Fe-4S ferredoxin, iron-sulfur binding protein; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding protein; manually curated; IMG reference gene:2505284101.
 
 
 0.836
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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