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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH45925.1Rhomboid family protein; InterPro IPR002610; KEGG: geo:Geob_1665 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Rhomboid family protein; IMG reference gene:2505285412; PFAM: Rhomboid family. (283 aa)    
Predicted Functional Partners:
AEH45926.1
KEGG: tye:THEYE_A1270 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505285413.
 
    0.703
AEH44046.1
KEGG: dds:Ddes_0888 protein of unknown function UPF0153; SPTR: Putative uncharacterized protein; IMG reference gene:2505283444; PFAM: Uncharacterised protein family (UPF0153).
  
    0.695
AEH44915.1
Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: ddf:DEFDS_0015 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: N-acetylmuramoyl-L-alanine amidase; IMG reference gene:2505284354; PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes.
  
   0.579
AEH45924.1
Hemerythrin-like metal-binding protein; COGs: COG2703 Hemerythrin; InterPro IPR012312:IPR012827; KEGG: mgm:Mmc1_1585 methyl-accepting chemotaxis sensory transducer; PFAM: Hemerythrin HHE cation binding domain protein; SPTR: Hemerythrin-like, metal-binding; TIGRFAM: hemerythrin-like metal-binding protein; IMG reference gene:2505285411; PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain.
       0.557
AEH45084.1
KEGG: dps:DP3093 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284529.
  
     0.554
AEH45885.1
KEGG: dal:Dalk_0099 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505285371.
  
     0.534
tatA
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.510
AEH45116.1
Twin-arginine translocation protein, TatB subunit; COGs: COG1826 Sec-independent protein secretion pathway components; InterPro IPR018448:IPR003369:IPR003998; KEGG: sul:SYO3AOP1_1474 twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Twin-arginine translocation protein, TatB subunit; TIGRFAM: twin-arginine translocation protein, TatB subunit; IMG reference gene:2505284561; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin arginine-targeting protein translocase TatB.
   
 
 0.510
tatA-2
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.510
AEH45584.1
KEGG: dps:DP0127 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505285051.
  
     0.488
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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