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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH45974.1Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004:IPR018076; KEGG: alv:Alvin_3015 type II secretion system F domain protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system F domain protein; IMG reference gene:2505285463; PFAM: Bacterial type II secretion system protein F domain. (399 aa)    
Predicted Functional Partners:
AEH45972.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR007831:IPR003593; KEGG: dat:HRM2_30260 GspE3; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: GspE3; IMG reference gene:2505285461; PFAM: Type II/IV secretion system protein.
 
 
 0.984
AEH44292.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterProIPR001440:IPR007831:IPR001482:IPR019734:IPR 013026:IPR003593; KEGG: sat:SYN_01404 general secretion pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; Tetratricopeptide TPR_1 repeat-containing protein; SMART: AAA ATPase; Tetratricopeptide repeat; SPTR: General secretion pathway protein E; IMG reference gene:2505283699; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain.
 
 
 0.938
AEH45742.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR007831:IPR003593; KEGG: pmx:PERMA_0977 type IV pilus assembly protein TapB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2505285217; PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein.
 
 
 0.932
AEH45973.1
General secretion pathway protein G; COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR000983:IPR012902:IPR013545:IPR010054; KEGG: tbd:Tbd_1293 tyep II secretion system protein G; PFAM: type II secretion system protein G; SPTR: Tyep II secretion system protein G; TIGRFAM: general secretion pathway protein G; IMG reference gene:2505285462; PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.902
AEH45975.1
InterPro IPR007813; KEGG: sfu:Sfum_3660 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Fimbrial assembly family protein; IMG reference gene:2505285464; PFAM: Fimbrial assembly protein (PilN).
   
 
 0.868
AEH45132.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.828
AEH45981.1
General secretion pathway protein D; COGs: COG1450 Type II secretory pathway component PulD; InterProIPR001775:IPR001814:IPR005644:IPR004846:IPR 013356; KEGG: ara:Arad_9991 general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; SPTR: General secretion pathway protein D; TIGRFAM: general secretion pathway protein D; IMG reference gene:2505285470; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D.
 
  
 0.789
AEH45991.1
Twitching motility protein; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR003593:IPR001482:IPR006321; KEGG: dak:DaAHT2_1068 twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Twitching motility protein; TIGRFAM: twitching motility protein; IMG reference gene:2505285480; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT.
 
  
 0.782
AEH45990.1
Twitching motility protein; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482:IPR006321; KEGG: dal:Dalk_3301 twitching motility protein; PFAM: type II secretion system protein E; SPTR: Twitching motility protein; TIGRFAM: twitching motility protein; IMG reference gene:2505285479; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT.
 
  
 0.781
trpF
COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: tye:THEYE_A0943 N-(5'phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; IMG reference gene:2505285460; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; Belongs to the TrpF family.
       0.773
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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