Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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AEH45975.1InterPro IPR007813; KEGG: sfu:Sfum_3660 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Fimbrial assembly family protein; IMG reference gene:2505285464; PFAM: Fimbrial assembly protein (PilN). (388 aa)    
Predicted Functional Partners:
AEH44397.1
COGs: COG4972 Tfp pilus assembly protein ATPase PilM; KEGG: dol:Dole_0333 type IV pilus assembly protein PilM; SPTR: Type IV pilus assembly protein PilM; IMG reference gene:2505283809; PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM.
 
 
 0.902
AEH45980.1
Hypothetical protein; KEGG: sfu:Sfum_3661 type II secretory pathway component PulK-like; SPTR: Similar to general secretory pathway protein K; IMG reference gene:2505285469; PFAM: General secretion pathway protein K.
 
     0.864
AEH45972.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR007831:IPR003593; KEGG: dat:HRM2_30260 GspE3; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: GspE3; IMG reference gene:2505285461; PFAM: Type II/IV secretion system protein.
  
 
 0.852
AEH44395.1
Hypothetical protein; KEGG: dak:DaAHT2_2311 pilus assembly protein PilO; SPTR: Pilus assembly protein PilO; IMG reference gene:2505283807; PFAM: Pilus assembly protein, PilO.
 
 
 0.840
AEH45974.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004:IPR018076; KEGG: alv:Alvin_3015 type II secretion system F domain protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system F domain protein; IMG reference gene:2505285463; PFAM: Bacterial type II secretion system protein F domain.
   
 
 0.836
AEH45973.1
General secretion pathway protein G; COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR000983:IPR012902:IPR013545:IPR010054; KEGG: tbd:Tbd_1293 tyep II secretion system protein G; PFAM: type II secretion system protein G; SPTR: Tyep II secretion system protein G; TIGRFAM: general secretion pathway protein G; IMG reference gene:2505285462; PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain.
 
    0.813
AEH44393.1
Type IV pilus secretin PilQ; COGs: COG4796 Type II secretory pathway component HofQ; InterPro IPR013355:IPR011662:IPR004846:IPR001775; KEGG: pfo:Pfl01_0409 type II and III secretion system protein; PFAM: type II and III secretion system protein; Secretin/TonB short domain; SPTR: Pilus secretin; TIGRFAM: type IV pilus secretin PilQ; IMG reference gene:2505283805; PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ.
  
 
 0.788
AEH44394.1
KEGG: mxa:MXAN_5773 putative lipoprotein; SPTR: Fimbrial assembly protein; IMG reference gene:2505283806; PFAM: Pilus assembly protein, PilP.
 
  
 0.780
AEH44897.1
InterPro IPR013249:IPR014284; KEGG: oan:Oant_4467 FliA/WhiG family RNA polymerase sigma 28 subunit; PFAM: Sigma-70 region 4 type 2; SPTR: Putative RNA polymerase, sigma 28 subunit, FliA/WhiG family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; IMG reference gene:2505284336; PFAM: Sigma-70, region 4; Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
 
     0.775
trpF
COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: tye:THEYE_A0943 N-(5'phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; IMG reference gene:2505285460; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; Belongs to the TrpF family.
       0.773
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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