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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH45996.1Protein of unknown function DUF610 YibQ; COGs: COG2861 conserved hypothetical protein; InterPro IPR006837; KEGG: dol:Dole_2454 protein of unknown function DUF610 YibQ; PFAM: protein of unknown function DUF610 YibQ; SPTR: Putative uncharacterized protein; IMG reference gene:2505285485; PFAM: Divergent polysaccharide deacetylase. (312 aa)    
Predicted Functional Partners:
AEH45994.1
Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: glo:Glov_1921 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; IMG reference gene:2505285483; PFAM: Peptidase family M23.
 
   
 0.854
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
       0.799
AEH45993.1
Protein of unknown function DUF214; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: dak:DaAHT2_1197 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; IMG reference gene:2505285482; PFAM: Predicted permease; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.799
cmk
COGs: COG0283 Cytidylate kinase; InterPro IPR000623:IPR011994:IPR003136; KEGG: tte:TTE1350 cytidylate kinase; PFAM: cytidylate kinase region; shikimate kinase; SPTR: Cytidylate kinase; TIGRFAM: cytidylate kinase; IMG reference gene:2505285487; PFAM: Cytidylate kinase; Adenylate kinase; TIGRFAM: cytidylate kinase.
       0.783
AEH45995.1
COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447; KEGG: sfu:Sfum_3063 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; PRIAM: C-terminal processing peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; IMG reference gene:2505285484; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Belongs to the peptidase S41A family.
       0.781
hisC
COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004839:IPR005861:IPR001917; KEGG: dak:DaAHT2_2672 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; IMG reference gene:2505285486; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.779
AEH45999.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: aae:aq_1899 dolichol-phosphate mannosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Dolichol-phosphate mannosyltransferase; IMG reference gene:2505285488; PFAM: Glycosyl transferase family 2.
       0.779
AEH46000.1
Hypothetical protein; InterPro IPR005242; KEGG: min:Minf_2171 hypothetical protein; SPTR: Uncharacterized conserved membrane protein; IMG reference gene:2505285489; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
       0.779
AEH45989.1
Hypothetical protein; KEGG: dol:Dole_3051 response regulator receiver protein; SPTR: Response regulator receiver protein; IMG reference gene:2505285478.
 
     0.612
AEH45990.1
Twitching motility protein; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482:IPR006321; KEGG: dal:Dalk_3301 twitching motility protein; PFAM: type II secretion system protein E; SPTR: Twitching motility protein; TIGRFAM: twitching motility protein; IMG reference gene:2505285479; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT.
       0.547
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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