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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH46052.1KEGG: sfu:Sfum_1584 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505285543. (315 aa)    
Predicted Functional Partners:
AEH45040.1
InterPro IPR013429; KEGG: sfu:Sfum_1903 FmdB family regulatory protein; PFAM: Putative regulatory protein FmdB; SPTR: Putative regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; IMG reference gene:2505284483; PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family.
  
     0.606
tsaD
Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.524
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.524
AEH44007.1
InterPro IPR001623; KEGG: sfu:Sfum_2665 heat shock protein DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SPTR: Heat shock protein DnaJ domain protein; IMG reference gene:2505283405; PFAM: DnaJ domain.
  
     0.488
AEH44839.1
Hypothetical protein; COGs: COG1085 Galactose-1-phosphate uridylyltransferase; KEGG: sfu:Sfum_1834 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284275.
  
     0.467
AEH44194.1
Type IV pilus assembly PilZ; InterPro IPR009875; KEGG: dak:DaAHT2_1202 type IV pilus assembly PilZ; PFAM: type IV pilus assembly PilZ; SPTR: Type IV pilus assembly PilZ; IMG reference gene:2505283599; PFAM: PilZ domain.
  
     0.444
AEH45477.1
KEGG: sfu:Sfum_2762 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284939.
  
     0.436
AEH45975.1
InterPro IPR007813; KEGG: sfu:Sfum_3660 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Fimbrial assembly family protein; IMG reference gene:2505285464; PFAM: Fimbrial assembly protein (PilN).
  
     0.425
AEH45313.1
InterPro IPR007202; KEGG: dak:DaAHT2_0716 Fe-S cluster domain protein; PFAM: Fe-S cluster domain protein; SPTR: Putative Fe-S cluster; IMG reference gene:2505284768; PFAM: Putative Fe-S cluster.
  
     0.412
Your Current Organism:
Thermodesulfatator indicus
NCBI taxonomy Id: 667014
Other names: T. indicus DSM 15286, Thermodesulfatator indicus CIR29812, Thermodesulfatator indicus DSM 15286, Thermodesulfatator indicus str. DSM 15286, Thermodesulfatator indicus strain DSM 15286, Thermodesulfobacterium sp. CIR29812
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