STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY35026.1Single-strand binding protein; InterPro IPR000424:IPR011344; KEGG: bfr:BF2827 putative single stranded DNA binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb). (137 aa)    
Predicted Functional Partners:
ADY34967.1
InterPro IPR000424; KEGG: bfr:BF2915 putative single strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Putative uncharacterized protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
  
  
  0.927
ADY38050.1
COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424; KEGG: bfr:BF2915 putative single strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
  
  
  0.916
ADY37472.1
COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: bfs:BF1571 putative single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
     
  0.900
ADY37880.1
COGs: COG0587 DNA polymerase III alpha subunit; InterPro IPR004805:IPR003141:IPR004013:IPR011708:IPR004365; KEGG: bvu:BVU_1885 DNA polymerase III alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc).
   
 
 0.640
ADY35038.1
KEGG: str:Sterm_3339 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1266).
  
     0.621
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
    
 
 0.581
ADY35025.1
Hypothetical protein; KEGG: ppg:PputGB1_2339 TonB-dependent siderophore receptor; SPTR: Putative uncharacterized protein.
       0.570
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
  
 0.569
ADY35957.1
COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: bvu:BVU_1829 putative DNA polymerase III, delta subunit; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase III, delta' subunit.
    
 
 0.569
dnaX
DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
 
 0.569
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
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