STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY35489.1Hypothetical protein; COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: bvu:BVU_3465 hypothetical protein; SPTR: Putative uncharacterized protein. (957 aa)    
Predicted Functional Partners:
ADY35488.1
UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: bvu:BVU_3464 ATP-dependent helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF83; UvrD/REP helicase.
 
 
 0.992
ADY35626.1
KEGG: eca:ECA2180 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.910
ADY36199.1
Protein of unknown function DUF349; InterPro IPR007139; KEGG: bvu:BVU_1923 hypothetical protein; PFAM: Protein of unknown function DUF349; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF349).
  
     0.684
ADY36606.1
KEGG: bvu:BVU_1312 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT).
  
     0.597
ADY34620.1
KEGG: bvu:BVU_2610 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.582
ADY36637.1
Putative regulatory protein; Modulates RecA activity; Belongs to the RecX family.
 
   
 0.556
ADY35818.1
KEGG: bvu:BVU_3817 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.545
ADY35287.1
3'-5' exonuclease; COGs: COG0349 Ribonuclease D; InterPro IPR002562; KEGG: bvu:BVU_3624 hypothetical protein; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; SPTR: Putative uncharacterized protein; manually curated; PFAM: 3'-5' exonuclease.
 
     0.530
ADY35130.1
Protein of unknown function DUF107; InterPro IPR002810; KEGG: bvu:BVU_3647 hypothetical protein; PFAM: Nodulation efficiency, NfeD; SPTR: Putative uncharacterized protein; PFAM: NfeD-like.
 
     0.527
recO
DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
 
   
 0.519
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.