STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY35642.1KEGG: bth:BT_2643 hypothetical protein; SPTR: Putative uncharacterized protein. (90 aa)    
Predicted Functional Partners:
ADY35643.1
InterPro IPR015798; KEGG: bth:BT_2642 hypothetical protein; PFAM: Copper amine oxidase, C-terminal; SPTR: Putative uncharacterized protein.
  
    0.668
ADY35641.1
COGs: COG0550 Topoisomerase IA; InterPro IPR006171:IPR013497:IPR003601:IPR003602; KEGG: bth:BT_2644 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; SPTR: DNA topoisomerase; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid.
       0.608
ADY35639.1
KEGG: bsu:BSU07790 putative spore germination protein; SPTR: Putative uncharacterized protein.
       0.480
ADY35640.1
KEGG: kla:KLLA0E18965g hypothetical protein; SPTR: Two component transcriptional regulator, LuxR family.
       0.480
ADY35638.1
KEGG: fgr:FG03691.1 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.453
ADY35637.1
PRTRC system protein E; InterPro IPR022273; KEGG: bvu:BVU_1522 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: ParB-related, ThiF-related cassette, protein E; TIGRFAM: PRTRC system protein E.
       0.423
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
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