STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY35736.1Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: pdi:BDI_2138 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family. (406 aa)    
Predicted Functional Partners:
ADY35737.1
KEGG: pdi:BDI_2139 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.793
xerC
Tyrosine recombinase xerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
     0.620
xerC-2
Tyrosine recombinase xerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
     0.583
ADY35738.1
Hypothetical protein; COGs: COG3378 ATPase; KEGG: pdi:BDI_2140 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.581
ADY35740.1
KEGG: pdi:BDI_2141 DNA primase; SPTR: DNA primase.
 
    0.503
ADY35807.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107:IPR002104; KEGG: bth:BT_0036 integrase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Transposase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.502
ADY37781.1
KEGG: pdi:BDI_3258 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.499
ADY37633.1
Integrase family protein; InterPro IPR002104; KEGG: sli:Slin_5872 integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Putative uncharacterized protein; PFAM: Phage integrase family.
  
     0.487
ADY37973.1
Transposase; KEGG: pdi:BDI_3245 transposase; SPTR: Transposase; Belongs to the 'phage' integrase family.
  
     0.470
ADY35103.1
DNA binding domain protein, excisionase family; InterPro IPR010093; KEGG: bfr:BF2790 putative excisionase; SPTR: Putative excisionase; TIGRFAM: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family.
  
     0.453
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.