STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY35834.1KEGG: bth:BT_2509 putative transcriptional regulator; SPTR: Putative transcriptional regulator. (319 aa)    
Predicted Functional Partners:
ADY37840.1
KEGG: bfr:BF4311 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.653
ADY34930.1
Protein of unknown function DUF262; InterPro IPR004919; KEGG: azo:azo2045 hypothetical protein; PFAM: Domain of unknown function DUF262; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF262.
 
     0.613
ADY34929.1
Protein of unknown function DUF262; InterPro IPR004919; KEGG: swp:swp_4497 hypothetical protein; PFAM: Domain of unknown function DUF262; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF262.
 
     0.610
ADY35835.1
Protein of unknown function UPF0027; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: cbe:Cbei_3556 hypothetical protein; PFAM: Uncharacterised protein family UPF0027; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0027.
 
     0.592
ADY35744.1
UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: bth:BT_2999 helicase IV; PFAM: DNA helicase, UvrD/REP type; SPTR: Putative uncharacterized protein; PFAM: UvrD/REP helicase.
 
     0.528
ADY37421.1
KEGG: bth:BT_1491 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.499
ADY34900.1
RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
    
   0.481
ADY35371.1
KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6.
    
   0.481
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.481
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.481
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
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