node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADY35975.1 | ADY35976.1 | Bacsa_1403 | Bacsa_1404 | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | Major facilitator superfamily MFS_1; InterPro IPR011701; KEGG: bvu:BVU_2747 putative sugar transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein. | 0.833 |
ADY35975.1 | panB | Bacsa_1403 | Bacsa_1405 | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.715 |
ADY35975.1 | rplC | Bacsa_1403 | Bacsa_2020 | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.687 |
ADY35975.1 | rplD | Bacsa_1403 | Bacsa_2019 | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.658 |
ADY35975.1 | rplM | Bacsa_1403 | Bacsa_1899 | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.642 |
ADY35975.1 | rplT | Bacsa_1403 | Bacsa_1681 | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.641 |
ADY35975.1 | rplU | Bacsa_1403 | Bacsa_1241 | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.641 |
ADY35975.1 | rpsC | Bacsa_1403 | Bacsa_2014 | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.637 |
ADY35975.1 | rpsG | Bacsa_1403 | Bacsa_2023 | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.635 |
ADY35975.1 | rpsO | Bacsa_1403 | Bacsa_2221 | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.642 |
ADY35976.1 | ADY35975.1 | Bacsa_1404 | Bacsa_1403 | Major facilitator superfamily MFS_1; InterPro IPR011701; KEGG: bvu:BVU_2747 putative sugar transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein. | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | 0.833 |
ADY35976.1 | panB | Bacsa_1404 | Bacsa_1405 | Major facilitator superfamily MFS_1; InterPro IPR011701; KEGG: bvu:BVU_2747 putative sugar transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein. | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.737 |
panB | ADY35975.1 | Bacsa_1405 | Bacsa_1403 | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | 0.715 |
panB | ADY35976.1 | Bacsa_1405 | Bacsa_1404 | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | Major facilitator superfamily MFS_1; InterPro IPR011701; KEGG: bvu:BVU_2747 putative sugar transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein. | 0.737 |
rplC | ADY35975.1 | Bacsa_2020 | Bacsa_1403 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374:IPR003593:IPR003439; KEGG: bvu:BVU_2748 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. | 0.687 |
rplC | rplD | Bacsa_2020 | Bacsa_2019 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.999 |
rplC | rplM | Bacsa_2020 | Bacsa_1899 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.997 |
rplC | rplT | Bacsa_2020 | Bacsa_1681 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.985 |
rplC | rplU | Bacsa_2020 | Bacsa_1241 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.985 |
rplC | rpsC | Bacsa_2020 | Bacsa_2014 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.995 |