STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY36000.1COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: bvu:BVU_1607 glycerate kinase family protein; PFAM: Glycerate kinase; PRIAM: Glycerate kinase; SPTR: Glycerate kinase family protein; TIGRFAM: Glycerate kinase; PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family. (391 aa)    
Predicted Functional Partners:
ADY36094.1
COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: bvu:BVU_3910 glycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Phosphoglycerate dehydrogenase; SPTR: Putative uncharacterized protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
 
  
 0.934
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.910
ADY35951.1
Proposed homoserine kinase; COGs: COG3635 phosphoglycerate mutase AP superfamily; InterPro IPR013371:IPR004456:IPR019304:IPR006124; KEGG: bvu:BVU_2051 cofactor-independent phosphoglycerate mutase; PFAM: Bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme; PRIAM: Phosphoglycerate mutase; SPTR: Putative uncharacterized protein; TIGRFAM: Homoserine kinase, putative; Cofactor-independent phosphoglycerate mutase, archaeal; PFAM: Metalloenzyme superfamily; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglyce [...]
     
  0.900
tadA
CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.710
ADY35999.1
Amino acid/peptide transporter; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR005279:IPR000109; KEGG: pmz:HMPREF0659_A5870 amino acid/peptide transporter (peptide:H+ symporter); PFAM: Oligopeptide transporter; SPTR: Putative uncharacterized protein; TIGRFAM: Amino acid/peptide transporter; PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial.
       0.547
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
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