Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADY36465.1KEGG: bvu:BVU_1418 hypothetical protein; SPTR: Putative uncharacterized protein. (226 aa)    
Predicted Functional Partners:
ADY36464.1
COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: bvu:BVU_1419 RNA polymerase sigma-54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma factor 54; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor.
       0.808
ADY36912.1
KEGG: bvu:BVU_1037 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3108).
 
   
 0.678
ADY38116.1
KEGG: bvu:BVU_3062 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.650
ADY34791.1
KEGG: bvu:BVU_2560 peptidyl-prolyl cis-trans isomerase; SPTR: Putative uncharacterized protein.
 
     0.630
ADY36640.1
KEGG: bvu:BVU_0865 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.619
ADY36384.1
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR010071:IPR000873; KEGG: bfr:BF2961 putative peptide synthetase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Phenylalanine racemase (ATP-hydrolyzing); SPTR: Peptide synthetase; TIGRFAM: Amino acid adenylation; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.611
ADY37567.1
KEGG: bvu:BVU_1340 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.584
ADY38074.1
KEGG: bvu:BVU_2254 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.569
recO
DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
  
     0.535
ADY37200.1
KEGG: bvu:BVU_1969 putative ABC transporter ATP-binding protein; SPTR: Putative uncharacterized protein.
  
     0.522
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
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