node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADY35371.1 | rplQ | Bacsa_0778 | Bacsa_1992 | KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6. | COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: bvu:BVU_0779 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | 0.638 |
ADY35371.1 | rpoA | Bacsa_0778 | Bacsa_1993 | KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.980 |
ADY35371.1 | rpoB | Bacsa_0778 | Bacsa_2518 | KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.988 |
ADY35371.1 | rpoC | Bacsa_0778 | Bacsa_2519 | KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.981 |
ADY35371.1 | rpsC | Bacsa_0778 | Bacsa_2014 | KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.805 |
ADY35371.1 | rpsD | Bacsa_0778 | Bacsa_1994 | KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.891 |
ADY35371.1 | rpsE | Bacsa_0778 | Bacsa_2003 | KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.647 |
ADY35371.1 | rpsH | Bacsa_0778 | Bacsa_2006 | KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.857 |
ADY35371.1 | rpsK | Bacsa_0778 | Bacsa_1995 | KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.896 |
ADY35371.1 | rpsM | Bacsa_0778 | Bacsa_1996 | KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6. | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.891 |
rplQ | ADY35371.1 | Bacsa_1992 | Bacsa_0778 | COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: bvu:BVU_0779 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | KEGG: bvu:BVU_3042 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6. | 0.638 |
rplQ | rpoA | Bacsa_1992 | Bacsa_1993 | COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: bvu:BVU_0779 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.984 |
rplQ | rpoB | Bacsa_1992 | Bacsa_2518 | COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: bvu:BVU_0779 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.949 |
rplQ | rpoC | Bacsa_1992 | Bacsa_2519 | COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: bvu:BVU_0779 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.955 |
rplQ | rpsC | Bacsa_1992 | Bacsa_2014 | COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: bvu:BVU_0779 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.988 |
rplQ | rpsD | Bacsa_1992 | Bacsa_1994 | COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: bvu:BVU_0779 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.997 |
rplQ | rpsE | Bacsa_1992 | Bacsa_2003 | COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: bvu:BVU_0779 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.991 |
rplQ | rpsH | Bacsa_1992 | Bacsa_2006 | COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: bvu:BVU_0779 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.989 |
rplQ | rpsK | Bacsa_1992 | Bacsa_1995 | COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: bvu:BVU_0779 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.994 |
rplQ | rpsM | Bacsa_1992 | Bacsa_1996 | COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: bvu:BVU_0779 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.993 |