STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY36775.1alpha-L-rhamnosidase; COGs: COG4692 neuraminidase (sialidase); InterPro IPR013737:IPR008902; KEGG: bth:BT_1013 putative alpha-rhamnosidase; PFAM: Bacterial alpha-L-rhamnosidase; Bacterial alpha-L-rhamnosidase N-terminal; SPTR: Putative uncharacterized protein; PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain. (1273 aa)    
Predicted Functional Partners:
ADY37166.1
KEGG: bvu:BVU_2644 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.797
ADY36873.1
InterPro IPR006104; KEGG: cpi:Cpin_1809 glycoside hydrolase family 2 sugar binding; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
    0.712
ADY36872.1
KEGG: sli:Slin_1257 glycoside hydrolase family 2 sugar binding protein; SPTR: Putative uncharacterized protein.
  
    0.702
ADY36776.1
GTP-binding protein TypA; COGs: COG1217 membrane GTPase involved in stress response; InterPro IPR000795:IPR004161:IPR000640:IPR005225:IPR006298; KEGG: bvu:BVU_0974 GTP-binding elongation factor family protein TypA/BipA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-termin [...]
     
 0.683
ADY36175.1
Protein of unknown function DUF1680; COGs: COG3533 conserved hypothetical protein; InterPro IPR012878; KEGG: bvu:BVU_1122 hypothetical protein; PFAM: Protein of unknown function DUF1680; SPTR: Putative uncharacterized protein; PFAM: Putative glycosyl hydrolase of unknown function (DUF1680).
 
  
 0.679
ADY37167.1
Rhamnulokinase; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: bth:BT_3763 rhamnulose kinase/L-fuculose kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Rhamnulokinase; SPTR: Putative uncharacterized protein; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: rhamnulokinase.
  
     0.622
ADY37169.1
RhaT l-rhamnose-proton symport 2; InterPro IPR010476; KEGG: bth:BT_3765 rhamnose-proton symporter; PFAM: RhaT l-rhamnose-proton symport 2; SPTR: L-rhamnose/H+ symporter; PFAM: L-rhamnose-proton symport protein (RhaT).
  
     0.546
ADY37533.1
Lipolytic protein G-D-S-L family; InterPro IPR006104:IPR001087; KEGG: bvu:BVU_0187 hypothetical protein; PFAM: Lipase, GDSL; Glycoside hydrolase, family 2, carbohydrate-binding; SPTR: Putative uncharacterized protein.
  
    0.527
ADY35484.1
Alpha-L-fucosidase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: pdi:BDI_2423 glycoside hydrolase family protein; PFAM: Lipase, GDSL; PRIAM: Alpha-L-fucosidase; SPTR: Putative uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase.
 
    0.525
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.511
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
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